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The Evidence Convergence Protocol

A four-stage process for biotech research and development teams who need to make informed decisions about targets, indications or mechanisms of action. First, you define your decision criteria, then combine public and internal Multiomics data in the knowing01 platform to see where evidence converges, conflicts or is missing. Every step is traceable, from the scope to the final decision.

  • 4 stages From scoping to
    evidence-based results

  • 1 platform All in one
    Context Space

  • 2 to 4 weeks Towards a
    defensible decision

The four stages in detail

Each stage has a clear aim and a specific outcome that you carry forward into the next stage.

  1. Scope the tactical decision

    Define what decision the evidence needs to support.

    Before you start looking at data, first clarify the decision itself. You specify a measurable outcome, identify the input it applies to and then set the criteria you will use to evaluate the evidence. Deciding what would count as an answer in advance, before any results are available, ensures that the final conclusion remains objective and is not influenced by the person who conducted the analysis.

    You get: A measurable outcome, the specified input and defined evaluation criteria.

    Time required: A few hours to one day.

  2. Build the integrated data foundation

    Bring together the relevant evidence into a coherent data foundation.

    You bring the relevant public and private data into a single Context Space created specifically for this decision. Everything remains in its original format, while our proprietary Cellmap knowledge layer links the data across data types and organisms using identifiers, making every observation comparable. Your own input lists stay separate as hooks, ensuring that your intellectual property is never incorporated into the evidence base.

    You get: A Context Space holding and linking the public and private data relevant to this decision.

    Time required: 3 to 10 days.

    On the platform: The data center dashboard displays studies, datasets and your own hooks in a Context Space, along with their integration status.
  3. Contextualize against evaluation criteria

    Evaluate the evidence according to what matters for this specific decision.

    You run Contextualize on your input against the entire Context Space and receive a ranked, integrated evidence view where identifiers, synonyms and multi-maps are resolved for you, so nothing gets lost in translation. From there, you work through your criteria, check to what extent the evidence supports each individual criterion and whether it holds up, and change only one thing at a time to test how robust the overall picture really is. Every link can be traced back to its original dataset.

    You get: A ranked evidence view, a verdict for each criterion and a breakdown of which conclusions are confirmed and which are not.

    Time required: 4 to 8 days.

    On the platform: In Contextualize your input list is matched across all datasets and filtered by dataset groups and evidence thresholds.
  4. Generate a 360° evidence synthesis

    Identify supporting, conflicting, uncertain and missing evidence without being selective.

    You freeze the data version and evaluate each criterion based on its own evidence before bringing the data together. This prevents you from projecting an expected answer onto multiple datasets at the same time. The result is a defensible, traceable decision package: Every claim and figure can be traced back to a specific dataset and analysis run, and the decision is documented along with what would change it. Someone can revisit the package in six months and understand exactly how the decision was reached.

    You get: A documented, traceable decision package.

    Time required: 1 to 2 days.

    On the platform: The Comparative View shows you at a glance which evidence is strong, weak, below the threshold or missing for each criterion and target.

Ready to put the protocol into practice?

Book a short call and we will walk you through the knowing01 platform with your own decision in mind. Or would you prefer us to run it for you?

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